Insertion junction: CLIP2.049435_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049435
Chromosome:chromosome 12
Location:9022169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544900 (1 of 1) PTHR16470:SF0 - UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTCCTTACGCCCTACACCCCCTGCCCACCTGCCCTTCATTCCCTTCA
Internal bar code:GATTGAGTCTAACGCTTAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1562
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTTAGTTATGCCGCGTG
Suggested primer 2:GCAGGGAAATAGGTTGGGCT