Insertion junction: CLIP2.049436_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049436
Chromosome:chromosome 12
Location:4983221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524950 ENGB,ENGB1 Factor possbly involved in ribosomal 50S subunit assembly; (1 of 1) PTHR11649//PTHR11649:SF49 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // SUBFAMILY NOT NAMED 3'UTR
Cre12.g525000 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 5'UTR
Cre12.g801417 (1 of 41) PTHR10157 - DOPAMINE BETA HYDROXYLASE RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTTACTCCTTAGCAGCAAACTCTGGCGATATCCCTCCTCCATATGTA
Internal bar code:GGGTGTTCGAACACCGATTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTTCATTACGCGGCATG
Suggested primer 2:ATTCTCCCCACGTGTGTGTC