Insertion junction: CLIP2.049450_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049450
Chromosome:chromosome 13
Location:3902992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589870 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCGCGGTCACCCGCGCGGTGGGCCACTCGACGCACGCCGTGCATGGA
Internal bar code:TTGGTATTGGACTGAAATAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGCAAGGGGAAGAGAAA
Suggested primer 2:GGGAGCACCGATGTGTGTTA