Insertion junction: CLIP2.049455_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049455
Chromosome:chromosome 2
Location:1879825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087551 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAGAGGCTGCGGCACGGGTGGAGGTGGAGGCTGTCGCAGCGACTGTC
Internal bar code:CGCCTTGCTTTTTACAAGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6081
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTTGTTTGCATCCTGTG
Suggested primer 2:GGCTGAACTGGCGAAATCG