Insertion junction: CLIP2.049457_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049457
Chromosome:chromosome 2
Location:7002982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389578 PSBP5 PsbP-like protein of thylakoid lumen; (1 of 1) PTHR31407//PTHR31407:SF16 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 7, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAGTTCTAGCTGCGTTGGTAGACCAGGACTTAGAGGTCCGCGCTTGC
Internal bar code:CTACTTCATAACATGTTAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3498
LEAP-Seq percent confirming:67.4699
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCAAGCCCAAGCAAAAA
Suggested primer 2:CGAGTGCATCATTGTCAGCG