Insertion junction: CLIP2.049457_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049457
Chromosome:chromosome 2
Location:7002985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389578 PSBP5 PsbP-like protein of thylakoid lumen; (1 of 1) PTHR31407//PTHR31407:SF16 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 7, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGAGTGTTGTGTAACAATTACGCGACTTATCCGCGAGTGAGGTGCAAA
Internal bar code:TCCGCTCAAATAGGGCAGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3440
LEAP-Seq percent confirming:60.7843
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTGCATCATTGTCAGCG
Suggested primer 2:CCGTCAAGCCCAAGCAAAAA