Insertion junction: CLIP2.049457_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049457
Chromosome:chromosome 3
Location:2107699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156550 (1 of 1) PTHR22829//PTHR34826 - DEP DOMAIN PROTEIN // FAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCCACAGGTTCACGGATGATAACCACGTCGGCGGCACTGCGGGCGCT
Internal bar code:TATAACAATGCGAAAAGGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2965
LEAP-Seq percent confirming:92.7273
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGATGTCGTGGTGTCAGG
Suggested primer 2:GTATGATGGAGGCGGGTCTG