Insertion junction: CLIP2.049465_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049465
Chromosome:chromosome 16
Location:3891240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689050 ACX1,ACO1 Acyl-CoA oxidase/dehydrogenase; (1 of 1) PTHR10909//PTHR10909:SF250 - ELECTRON TRANSPORT OXIDOREDUCTASE // PEROXISOMAL ACYL-COENZYME A OXIDASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTTCGGTTTAACTTGGGCTGGTATTCACAACCCCCCCCCGGTCCTGT
Internal bar code:CTTGTTTGCGGATTAGTTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1241
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGGCATGAGAGGTTAGA
Suggested primer 2:AACCCCCGCTACTCTAACCT