Insertion junction: CLIP2.049471_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049471
Chromosome:chromosome 3
Location:7552892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCCCACGCTTGCGTCCTGCCTGCACCCACTCGCCCTCACCGCACCTTC
Internal bar code:GAACTTCATTACGAACATTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:6176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTGCCCTCACTTGAGTT
Suggested primer 2:TTGTTAGCTGCGGGTTAGCA