Insertion junction: CLIP2.049480_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049480
Chromosome:chromosome 16
Location:3762851
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684861 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTACCGCCCTCAACCCCACCGGCAGCAGCAGGTGCCCAGCAGTCTGGG
Internal bar code:TATATTGATCGTTCTTACGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1778
LEAP-Seq percent confirming:83.0769
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGACCTCGCTGCAACAT
Suggested primer 2:GATGCCTCCTACGAAGTCCG