Insertion junction: CLIP2.049483_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049483
Chromosome:chromosome 11
Location:2045631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467759 PIC1,PIC1-2 (1 of 2) PTHR34548:SF2 - PROTEIN TIC 21, CHLOROPLASTIC; Similar to AtTic21/PIC1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCGTGCCGAAAGTAACACTGCTAAACAGCAACTCCTTCGAAAGACGC
Internal bar code:CCCGAGAAGAGGGCGGGATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:484
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTGTCCACCTTCTTCGC
Suggested primer 2:AGCTCCTACATCCCACCAGT