Insertion junction: CLIP2.049488_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049488
Chromosome:chromosome 5
Location:544242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244400 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGAGCTCATAACATTTCTGCGTGGGATACCCAGGAATGACGGGTTGTG
Internal bar code:GGAGCAGGTCAATCCGTTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2176
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGCACAACCCAGAGTAG
Suggested primer 2:TACAAGCACCTGCATGGGAG