Insertion junction: CLIP2.049493_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049493
Chromosome:chromosome 2
Location:7837664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146200 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCGGGACAGGTGCAGGCGGCGGCACGTCTCAGGGCGGGGTAGGCGGC
Internal bar code:GAAGTACGCGTTGGGGCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1615
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTAGGCACATCGGAAACA
Suggested primer 2:AGAATTAAACTCCCGCGCCA