Insertion junction: CLIP2.049494_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049494
Chromosome:chromosome 1
Location:3842365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025200 MMP4 Metalloproteinase of VMP family; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTGGCTTCAAGAGCACGCATAGGGATTCGTTCAAGCGCGTCTGCGCA
Internal bar code:AGAAAAACTATAACTAACATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:61.7647
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCGGTCCTTGTACTGGT
Suggested primer 2:TACCAATACCGAGGCGATGC