Insertion junction: CLIP2.049500_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049500
Chromosome:chromosome 8
Location:3706397
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380300 MSRA3 (1 of 1) PTHR10173//PTHR10173:SF30 - METHIONINE SULFOXIDE REDUCTASE // SUBFAMILY NOT NAMED; Peptide methionine-S-sulfoxide reductase, msrA-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCACCCGCGAACGTCGCCAACTTCAGTCCCTCTGGGGCCTGCGCAGGC
Internal bar code:GCGCGCTGTGTGTTGCCCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2838
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGCGTCCTCTGGAAGTT
Suggested primer 2:ATTGCTTGGGGTCGTAGGTG