Insertion junction: CLIP2.049505_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049505
Chromosome:chromosome 2
Location:2301089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090500 HEL10 (1 of 1) K13131 - ATP-dependent RNA helicase DDX20 (DDX20, GEMIN3); DEAD box ATP-dependent RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTTGTGTGTGCGTGTGTGTGTGTATATGTATGTGTGTGTATGTGTGT
Internal bar code:CTGTGTGACTCATTTGGATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:725
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGCATGTAACCCCCACC
Suggested primer 2:CTTCACACCGAGCAGGCTTA