Insertion junction: CLIP2.049506_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049506
Chromosome:chromosome 16
Location:5366530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683400 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTTGAGAGGACGAGCGTCAATTTGACGCTGCTAGTTGGCGCGACCAC
Internal bar code:CTTCAGCATACTTCCGGTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1888
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCACAATATTACGCGCA
Suggested primer 2:TAGGGTATCAGCTGGCACCT