Insertion junction: CLIP2.049513_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049513
Chromosome:chromosome 12
Location:5989970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534200 (1 of 1) PTHR24365//PTHR24365:SF381 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGTGCGAAGCCTGCGTCAAGGCGCCCTTTGCCAAACGCAGCGGTGG
Internal bar code:TGGGCGCTAAGCACTCCATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2982
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTAGATCGTTCGACCTG
Suggested primer 2:ATCCTCTCCCCTCATTGCCT