Insertion junction: CLIP2.049513_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049513
Chromosome:chromosome 12
Location:5989973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534200 (1 of 1) PTHR24365//PTHR24365:SF381 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCACCCCTACCCCTGCGTCCTGGCACCTCATGTGTCAAGAAGGCGAA
Internal bar code:TTGAGGTGGGGTCTTCCATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1149
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCTCCCCTCATTGCCT
Suggested primer 2:CCCGTAGATCGTTCGACCTG