Insertion junction: CLIP2.049514_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049514
Chromosome:chromosome 13
Location:72604
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562300 HON2 Histone H1; (1 of 3) K11275 - histone H1/5 (H1_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACTCCCGCCTCGGGCGCAAAGGCCGCCAAGAAGCCCACCCCAGGCA
Internal bar code:TTAAGGCATCACACGAACGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2767
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCAGAAGACGGACCCAA
Suggested primer 2:CCCGCAACAACTTTGTCCTG