Insertion junction: CLIP2.049530_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049530
Chromosome:chromosome 11
Location:3050091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g474700 BES6 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin); putative chloride channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTACACACATAGCCCCGCACGCTCAAGGGACCAGCGCTGGATTGCCCA
Internal bar code:TACGCGCATCGAATTTGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1594
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGTGTGCATGTTCGTG
Suggested primer 2:GTCACAAGCTGGTCGTCTCA