Insertion junction: CLIP2.049533_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049533
Chromosome:chromosome 14
Location:1080623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614450 Hypothetical protein; (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACCCACATCGCCCAGAGCATTTCCGAAAGCACCGGAGGGTGTGGCCA
Internal bar code:AACTAAAGCGGTTATACTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2287
LEAP-Seq percent confirming:51.3158
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GATCATGCATTTCCGTGCCC
Suggested primer 2:AGTGGGCAGAGGCAGAGATA