Insertion junction: CLIP2.049539_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049539
Chromosome:chromosome 13
Location:4297439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592400 LCI21 Low-CO2-inducible protein 21 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCAGGTACGCAGTTTCGAGCGGGTCACAGCAACATATAGATGCAGAC
Internal bar code:TATAGACTTTTTGTTGGAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2650
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAAGCGGCGAATACTCGG
Suggested primer 2:TTGTTGGTGGTGTCCGTTGA