Insertion junction: CLIP2.049541_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.049541
Chromosome:chromosome 6
Location:4841068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280250 (1 of 1) PTHR31018:SF3 - CELL WALL MANNOPROTEIN PST1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGGCAGGGCAGCCGCGGACCCACGGTTAAGCAGTTGTAATGTCGGAC
Internal bar code:TACCGTAAAACCCTCGTCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1975
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCAGGGCATTGTCATGTA
Suggested primer 2:CCGAATACAGCCAACATGCG