Insertion junction: CLIP2.049542_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049542
Chromosome:chromosome 2
Location:7898603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145650 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTGGGCAACCGCTACCGACGAAATGGCGGGTGGGAGCGCCTCTTCAC
Internal bar code:AATTTCGGCGGGCGATTATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGACAGAGGAGGAGGAG
Suggested primer 2:TTAGGCTAATCGCGCTGGAG