Insertion junction: CLIP2.049542_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049542
Chromosome:chromosome 2
Location:7898608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145650 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGAGGCGCCTGTCGCGCTGGCTGGCATGAAGGAGCGAGACTCTCAGC
Internal bar code:AATTTCGGCGGGCGATTATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:6027
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGCTAATCGCGCTGGAG
Suggested primer 2:TGTGGACAGAGGAGGAGGAG