Insertion junction: CLIP2.049551_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049551
Chromosome:chromosome 4
Location:3074081
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800483 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCAGCTTCCGCCCAAGCAGGGTCTCCAGGAGGGAGGAGGTGCGCTGC
Internal bar code:GGTAAAGTTCTAAGCGAGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:422
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGGGCAGATGCTAAAGA
Suggested primer 2:GCACTGCCTGCATAGCAATC