Insertion junction: CLIP2.049561_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049561
Chromosome:chromosome 14
Location:2774285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g626466 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTTGGGGCGAGCTGGGTGTATGTACGGTATGCGTGTGCGTGCATGTG
Internal bar code:ATGGTTACTGGACTAATCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:152
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCCAGCTCCAAGTCAC
Suggested primer 2:CGGAGCTGTGGTTCTGAACT