Insertion junction: CLIP2.049566_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049566
Chromosome:chromosome 3
Location:2485442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159254 AMT1,AMT1A (1 of 1) IPR001905//IPR024041//IPR029020 - Ammonium transporter // Ammonium transporter AmtB-like domain // Ammonium/urea transporter; Ammonium Transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGCAGGGTAGCTGGTGCGTGCGTGGCAGGACACCATAGTTACCATTT
Internal bar code:GGTGCTAGGCCTACACTAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3457
LEAP-Seq percent confirming:63.8889
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAGAAATCGCTCCGTCG
Suggested primer 2:TTCAACACACATGCACGCAG