Insertion junction: CLIP2.049568_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049568
Chromosome:chromosome 1
Location:7901412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800144 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGGAGTCCGCCAGCTTGCGGGCCGTCAGCGCGGCCTGCGCCTCCTC
Internal bar code:TTATTCTCTTAACTTCTGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:960
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGGACATTGCGTTGCCA
Suggested primer 2:TAGTTGACGGCCAGGCTTAC