Insertion junction: CLIP2.049581_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049581
Chromosome:chromosome 3
Location:4813047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178100 MOT51 (1 of 1) PTHR10877//PTHR10877:SF116 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; Predicted protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTGGGGCAGTTCCAGGAGACGGACCCTATTGTGGGCGACGGCGAGCT
Internal bar code:ACCGGTAGTCATAATTTCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2521
LEAP-Seq percent confirming:97.8495
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTGTACGGGGTAGGGTA
Suggested primer 2:GTTCCACACGCTCAAGGAGA