Insertion junction: CLIP2.049584_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049584
Chromosome:chromosome 7
Location:400552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314866 EBM4 (1 of 9) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase; Mannan endo-1%252C4-beta-mannosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCGCAACCCGCCCGCCCACCTGAGCGCCTCCTGCAGGTGTGCGGCCA
Internal bar code:AATTCAGCAAGCCCGGAAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:927
LEAP-Seq percent confirming:61.2245
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTACATGGCCAACTTCCT
Suggested primer 2:GCGACACCCCCATATCCAAA