Insertion junction: CLIP2.049593_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049593
Chromosome:chromosome 12
Location:5958853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801437 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAGCGATAATACTTATGGGATGTGGGCCGAGGCGTCGTGGAGCAGC
Internal bar code:CATGCCGCAGAGCGCCTCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:771
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGTAATGTGTGGAAGGA
Suggested primer 2:GGCTTGAGGTAGGGAGGGTA