Insertion junction: CLIP2.049601_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049601
Chromosome:chromosome 7
Location:1456574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323750 HAS2 (1 of 1) K06133 - 4'-phosphopantetheinyl transferase (LYS5, acpT); Holo-[acyl-carrier-protein] synthase CDS
lncRNA_TCONS_00052104 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCGAGCAGCACGCGACGTTGTTTCGAGTCGTGGCGATGCTGAGGCC
Internal bar code:CCGGCACACAACTGTTGCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2439
LEAP-Seq percent confirming:15.5556
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGTGGGGATTCCGTAAC
Suggested primer 2:TGATGAGCATTGGCCACACT