Insertion junction: CLIP2.049606_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049606
Chromosome:chromosome 7
Location:918064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318950 (1 of 1) IPR000008//IPR000104//IPR003072 - C2 domain // Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGACGAGGACGGCCTCGGCAAGAGCCTGGTTGGGCTGGTGAGGCGGGC
Internal bar code:GCGGGTCCGGTCGCGTTTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:836
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCATGCTGCTGTGGCTTA
Suggested primer 2:CGTGGAGGCTCTGTTTCAGT