Insertion junction: CLIP2.049608_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.049608
Chromosome:chromosome 3
Location:6252923
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTCTGCACGGCTGCCGGCGGCGCGCCCGCGGCTATCAGCCGTTCTGC
Internal bar code:ATGATATTAATAATAGAGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGACGCACACACTATG
Suggested primer 2:CCGCTGCTTTCACTGCTTTT