Insertion junction: CLIP2.049608_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049608
Chromosome:chromosome 3
Location:6252926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGTGCTGGACGGGCTGAAGGCGCTGACGGAGGCGGTGGCGGATCTGG
Internal bar code:CCACTGGATCTTGGTATACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2080
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGCTTTCACTGCTTTT
Suggested primer 2:CATGCGACGCACACACTATG