Insertion junction: CLIP2.049612_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049612
Chromosome:chromosome 17
Location:1747227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708650 HFO27,HFO20 (1 of 33) K11254 - histone H4 (H4); Histone H4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACTGTGCGGGTCTCCTCGTAGATAAGGCCGCTGATACGCTTCACACCG
Internal bar code:GCGATCGCTCCCGAACTCAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4498
LEAP-Seq percent confirming:95.7447
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGGGCATGATGGTCAC
Suggested primer 2:CTGTCTTTGGCTCAGGCAGA