Insertion junction: CLIP2.049618_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.049618
Chromosome:chromosome 7
Location:2130222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g326550 (1 of 12) IPR008928 - Six-hairpin glycosidase-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACCATCCGTACAGCCGCGCGCCGGCATACTACGCGCACCTGCAGCC
Internal bar code:ACAGGTGCATGGATTCCGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1922
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATAGGTTGTCACAGGGT
Suggested primer 2:AGCAGGCCTTGTCACTTCTC