Insertion junction: CLIP2.049621_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049621
Chromosome:chromosome 12
Location:2643786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505750 RPB9 DNA-directed RNA polymerase II, 14.5 kDa polypeptide; (1 of 1) K03017 - DNA-directed RNA polymerase II subunit RPB9 (RPB9, POLR2I) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACGTGCAACTACTGTGTGCAGGCGGATCCCTCGGAGTGGTGCGTGTAC
Internal bar code:TGTGCGTGGTGTTTCTATGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3615
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGCGTAACCCGAAATC
Suggested primer 2:CAACGTGTGCAGGAAGTGTG