Insertion junction: CLIP2.049622_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049622
Chromosome:chromosome 3
Location:8763672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207713 ISA3 Isoamylase, starch debranching enzyme 3; (1 of 2) 3.2.1.68 - Isoamylase / Debranching enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACTGTAATCCCACCCCACACCCCAGGCATGAAGCGCGCCTTCGCCAC
Internal bar code:TCCTCGAGTCATCGAAGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:572
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GATGATCTCATCGCCTGGCA
Suggested primer 2:GGTCGGTTTGCAAAGCATGT