Insertion junction: CLIP2.049623_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049623
Chromosome:chromosome 10
Location:4752723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452600 (1 of 1) PTHR33911:SF1 - RRNA-PROCESSING PROTEIN EFG1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCTTGGCAGCAGCGGCGGGGGCTGCCTTGGCTGCAGGCGCCGCCGCCG
Internal bar code:CTGTTGATGCGTGACACCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1535
LEAP-Seq percent confirming:69.5652
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTTCCGGCCCTGATGAAG
Suggested primer 2:CGTATCGTCCTCCTCTGCAC