Insertion junction: CLIP2.049632_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049632
Chromosome:chromosome 16
Location:6007571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678450 Glycosyl transferase; (1 of 2) PTHR10859//PTHR10859:SF50 - GLYCOSYL TRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGGCACTGGCGGAGGCAGTGGGGCGGCTGGCCGTGGGGGCGGCGGAG
Internal bar code:CGCTGATCACTAGGTGCATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2009
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAATTCAAGCCCAAGCCC
Suggested primer 2:TCGATCCCAAGCCACTTTCC