Insertion junction: CLIP2.049632_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.049632
Chromosome:chromosome 16
Location:6007602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678450 Glycosyl transferase; (1 of 2) PTHR10859//PTHR10859:SF50 - GLYCOSYL TRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGTGTCGCTGTCGCCCAAAGCACGCAAGGCCGTCGAATAATGGCGGA
Internal bar code:TTCCAGTAGGTCTTGAGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1881
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATCCCAAGCCACTTTCC
Suggested primer 2:CCAAATTCAAGCCCAAGCCC