Insertion junction: CLIP2.049634_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049634
Chromosome:chromosome 7
Location:2892403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332500 AXT2 (1 of 3) PTHR10994:SF69 - PROLINE-RICH PROTEIN 18; Arabinose chain extension enzyme for HRGP 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATGGGTGCGCGTGTTGGGTCAGCAAGGGCGGCACCGCACCGTGGCGC
Internal bar code:CAGCGATTGATGGTGGGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3608
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTCACAGCCTTGCTCAT
Suggested primer 2:GATCGTGCTTCATGCGTCAC