Insertion junction: CLIP2.049640_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049640
Chromosome:chromosome 16
Location:1093103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649600 PUF4 Puf protein; (1 of 1) K14790 - nucleolar protein 9 (NOP9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGACAAAGGGTGACGGAACGAGCCATGAAAGGATGTGTTCCGATCGT
Internal bar code:TGCTGAGGGTGCCCACCCAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2842
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCGGCAGGTTCACATTG
Suggested primer 2:CGGACGAGCTTGCGTTTATG