Insertion junction: CLIP2.049655_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.049655
Chromosome:chromosome 4
Location:3986540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00242258

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCACCTGAGCCCCATCGTGTCATTCCGCTGCCGTTCTCTGCCAAAGC
Internal bar code:TGGTACCACTGCCCACTGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1107
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCGCCACTCATACACTG
Suggested primer 2:GTCCAGGCAGGTCGTTAACA