Insertion junction: CLIP2.049656_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049656
Chromosome:chromosome 16
Location:4767066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687850 PTK22 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype; Protein of unknown function intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCACAGTCACCACCGTGCCTCGGCGACACATGGACGCGCGTGAGGCAA
Internal bar code:AGCTCACCGGCCCCCTCCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2638
LEAP-Seq percent confirming:89.7959
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGACATACGGAGTCGGTG
Suggested primer 2:TCGTCGTCAATTGTACGGCA