Insertion junction: CLIP2.049658_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049658
Chromosome:chromosome 14
Location:1763380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619300 CYN16 Cyclophilin 16; (1 of 60) 5.2.1.8 - Peptidylprolyl isomerase / Rotamase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATGACCCATTCCGCCAGTGTCACGCATGCCGCCACCGTCTTCGCGTC
Internal bar code:GCCAAGCCAAAATCGACGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1675
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGAGACCATACTTACCCG
Suggested primer 2:CCAACAGCAACAGTCACGTG