Insertion junction: CLIP2.049669_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.049669
Chromosome:chromosome 13
Location:1558939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572950 E2F2,E2FR1 Transcription factor, E2F and DP-related; (1 of 2) PTHR12548//PTHR12548:SF9 - TRANSCRIPTION FACTOR DP // TRANSCRIPTION FACTOR DP CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGCATGCGCCACAGGCGCCGCTGCAGGAGCTGCAGCAGACGTGGGC
Internal bar code:CGCATGGTACGCGCACTAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2328
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTTGCAGCACGTGTCAT
Suggested primer 2:CAGGTATTCCCACAGCAGCA